BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E08LP1|AL425878
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1569 1570 0.0
>3x_Contig1569
Length = 11625
Score = 1570 bits (792), Expect = 0.0
Identities = 795/796 (99%)
Strand = Plus / Minus
Query: 1 gatccatttttgatgggattctataccttcagcagatagaccaatcaacttcacgtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 gatccatttttgatgggattctataccttcagcagatagaccaatcaacttcacgtttct 1266
Query: 61 ttggtcgaattctggcttcaacttggcaaaggcacccaattcagttgtgcacactggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ttggtcgaattctggcttcaacttggcaaaggcacccaattcagttgtgcacactggggt 1206
Query: 121 gaaatcagctgggtgagagaaaagaacagcccacgagttcccaatgtattcatggaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 gaaatcagctgggtgagagaaaagaacagcccacgagttcccaatgtattcatggaaatt 1146
Query: 181 gaccttacccgcagtagtatcagctgtgaaatttggagcaacagagttgattctcaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 gaccttacccgcagtagtatcagctgtgaaatttggagcaacagagttgattctcaatct 1086
Query: 241 tggttggtcttcttgcttgaaagttctgatgaatctaacagaagttctgagaggttgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 tggttggtcttcttgcttgaaagttctgatgaatctaacagaagttctgagaggttgctg 1026
Query: 301 gcgcaatacagaactctttgtttgaagcaaagcacgttggaacatcatcttgaagtgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gcgcaatacagaactctttgtttgaagcaaagcacgttggaacatcatcttgaagtgtgt 966
Query: 361 ttatctgactacgtgagttggcaggtctaatatgtcgctataatcgatgaaagttgttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ttatctgactacgtgagttggcaggtctaatatgtcgctataatcgatgaaagttgttca 906
Query: 421 attaaaaagttggagaactatcaatggtataactttgttagtaagaacttcttcccctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 attaaaaagttggagaactatcaatggtataactttgttagtaagaacttcttcccctta 846
Query: 481 tatatggtgtaaatgttgttgcaatgtattaactgtggctccccatatactggacgattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 tatatggtgtaaatgttgttgcaatgtattaactgtggctccccatatactggacgattt 786
Query: 541 tctgtttctttacaaatctatttcacggtaaatgcagtatgttttgctgaaaattgaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tctgtttctttacaaatctatttcacggtaaatgcagtatgttttgctgaaaattgaaga 726
Query: 601 catgaaaaaaaggccaagatttacgatcacgtgatttggccttgatgacagttagattta 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 725 catgaaaaaaaggccaagatttacgatcacgtgatttggccttgatgacagtaagattta 666
Query: 661 cctcttggtctttcaatgtttaactagaagtttaatcttttcttgccttgagttgacttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cctcttggtctttcaatgtttaactagaagtttaatcttttcttgccttgagttgacttt 606
Query: 721 aaacattgaaaagaacatattatgctttgaagaataaatgaaccattgtcatttctttgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaacattgaaaagaacatattatgctttgaagaataaatgaaccattgtcatttctttgc 546
Query: 781 cattaagatatactaa 796
||||||||||||||||
Sbjct: 545 cattaagatatactaa 530
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7321
Number of Sequences: 1807
Number of extensions: 7321
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)